BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007G03LP1|AL425749
(734 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1274 1454 0.0
>3x_Contig1274
Length = 5941
Score = 1454 bits (733), Expect = 0.0
Identities = 733/733 (100%)
Strand = Plus / Plus
Query: 2 gttatcaccagttgatgatttcggtactacagagggattcccctccgatttcgttaacaa 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 759 gttatcaccagttgatgatttcggtactacagagggattcccctccgatttcgttaacaa 818
Query: 62 cagagacacctactattatttgaccaggttctcattctgtttctttttgattgctttagt 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 819 cagagacacctactattatttgaccaggttctcattctgtttctttttgattgctttagt 878
Query: 122 tttcatcggtgtcggattaatcttttacgtcttgtcctggtgttcttacagtttcaccaa 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 879 tttcatcggtgtcggattaatcttttacgtcttgtcctggtgttcttacagtttcaccaa 938
Query: 182 gacggtgtttgtgaccattgttatcggtactctattgaacatggctgccagtgcgtgtca 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 939 gacggtgtttgtgaccattgttatcggtactctattgaacatggctgccagtgcgtgtca 998
Query: 242 aacggctgctacggtgttggccaaaaacgctttcaaagacgccgatgtctctgtggatat 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 999 aacggctgctacggtgttggccaaaaacgctttcaaagacgccgatgtctctgtggatat 1058
Query: 302 cggtgtgaaattgatggcgttctcttggactacggtagcgttgaacattatgcttttctt 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1059 cggtgtgaaattgatggcgttctcttggactacggtagcgttgaacattatgcttttctt 1118
Query: 362 cattaccggtgcctctttcatcagaaaggcttacaaggctcataaggaatttgtcgaatt 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1119 cattaccggtgcctctttcatcagaaaggcttacaaggctcataaggaatttgtcgaatt 1178
Query: 422 gcaaaattacaaggaacaagcgttgagttacgagcaacaacaacagcagttgcaattcca 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1179 gcaaaattacaaggaacaagcgttgagttacgagcaacaacaacagcagttgcaattcca 1238
Query: 482 acagcagcagcaacaacaagatttggaagctaccggtgctggtactgccatcgatgagcc 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1239 acagcagcagcaacaacaagatttggaagctaccggtgctggtactgccatcgatgagcc 1298
Query: 542 ccagccacaagaatctcaccagaccggtatcaagttcttcaagattagaagaactcaaaa 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1299 ccagccacaagaatctcaccagaccggtatcaagttcttcaagattagaagaactcaaaa 1358
Query: 602 atctgatgaagaatcgatttgagaggtgataggtgattagcggggggagatgaaaagtgt 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1359 atctgatgaagaatcgatttgagaggtgataggtgattagcggggggagatgaaaagtgt 1418
Query: 662 tacaacgtttgtctcgcaccctgtaaccttatactattgaacaaaccaactaaaacaaaa 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1419 tacaacgtttgtctcgcaccctgtaaccttatactattgaacaaaccaactaaaacaaaa 1478
Query: 722 aaaaaaactacta 734
|||||||||||||
Sbjct: 1479 aaaaaaactacta 1491
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 12,554
Number of Sequences: 1807
Number of extensions: 12554
Number of successful extensions: 222
Number of sequences better than 1.0e-20: 1
length of query: 734
length of database: 10,358,551
effective HSP length: 16
effective length of query: 718
effective length of database: 10,329,639
effective search space: 7416680802
effective search space used: 7416680802
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)